Remove deprecated methods.
Add read streaming capability to the underlying connection.
Add a read method to stream data directly to a file.
Stream zip data from server.
Update t2-run-workflow so that debug is optional.
Stream baclava data from server.
Expose streaming capability to output ports.
Bring port error handling inline with normal values.
Tidy up usage of a mime-type for empty ports.
Add methods to test for empty ports or port values.
Add output port data streaming functionality.
Stream output data directly to a file.
Document the credentials classes.
Add general stream-to-stream data downloads.
Expose stream-to-stream methods in the Run class.
Add upload streaming to the underlying connection.
Stream uploads of workflows and data.
Add streaming examples to the README.
Make XPath searching robust to nodes not being found.
Read interaction feed URI and query support with API.
Read notifications from the interaction feed.
Document the Interaction Service additions in the README.
Add a bit more compatibility info to the Readme.
Clean up run caching code in the Server class.
Clean up variables and comments for run creation.
Code clarity improvements.
Remove duplicated download/streaming code in Run.
Remove duplicate URI stripping code from Server.
Improve readability of the XML fragments.
Add a global complied XPath cache and use for Server.
Use global XPath cache for Run class.
Add Ruby 2.0.0 as known to work in README.
t2-delete-runs: Minor code clean-up.
t2-delete-runs: Add a flag to only delete finished runs.
t2-run-workflow: Minor code clean-up.
t2-run-workflow: Add flag for service credentials.
Server now returns 503 when at capacity.
Server now has a limit on concurrently running runs.
Test for max concurrently running runs.
t2-run-workflow: Cope with hitting max running runs.
t2-server-stress: Cope with hitting max running runs.
Ensure all unit tests delete runs that they create.
Mark deleted runs as such in their Run object.
Run#permissions returns nil, instead of :none
Add a function to download a single port as a zip file.
Added ssl_version to connection parameters
Put a guard in to check that the SSL version is sensible.
Add SSL version support to the command line tools.
Add a new example connection parameter class for SSL version 3.
Describe the connection parameters in more detail.
Add Run#error? to check all output ports for errors.
UnexpectedServerResponse now provides more information.
Remove the port value caching code.
Simplify the HTTP methods and clean up error handling.
Split up the CLI options code.
Improve version string parsing.
Handle server returning Accepted on run start.
Get the run name from the server.
t2-server-info: Display run names in list view.
Set the run name on the server.
t2-run-workflow: Set name of run on server.
t2-get-output: Get name of run from server.
OutputPort#zip now returns nil for singletons.
Fix well-hidden HTTPS connection setup bug.
Use a RunCache class instead of a Hash to store local run objects.
t2-server-info: Configurable run detail in list view.
Uninitialized connection parameters.
Move interaction code out of Server, into Run.
Simplifications for per-run feeds.
Get different types of notifications for a Run.
Expose the run notification/interaction locations.
Add Run#log to get run logs.
Add connection timeout parameters.
Enable interaction reply publishing.
Read the interaction serial number from the notification.
Enable retrieval of an interaction’s input data.
Correctly handle missing values in output ports.
Cleanup of the README and some delete additions.
Complete documentation coverage.
Update the parsing of the server version.
Optimize Server object creation.
Add URI manipulating methods to T2Server::Util.
Internal updates to use full URIs rather than relative paths.
Updates to the administrator interface to use full URIs.
URI code updates for secure workflow and permissions support.
Remove (deprecate) Server#delete_run.
Support direct PUT of data for newer versions of server.
Update the documentation of the Connection classes.
Minor updates to the top-level README.
Cleanup of t2-server-info script.
t2-run-workflow: Only print outputs if there are any.
Update unit test code for Ruby 1.9 compatibility.
Major reductions in the time taken to instantiate a Run object.
t2-server-info: Don’t list runs by default.
Move to persistent HTTP connections.
SSL certificate store changes.
t2-run-workflow: Add a switch to set the expiry date/time.
Support version 2 of the Server API.
Update example scripts to work with the new server API.
Retire the T2Server::API_VERSION constant.
Add a method to get expected inputs from the server.
Make the baclava input/output calls more “ruby-like”
Fix the Run#wait method to cope with finished runs.
Changes to Run and Server to yield created objects.
Add zip output facilities to the Run class.
Scripts: Add switches for passing user credentials.
t2-run-workflow: Exit if workflow is empty.
Top-level documentation updates.
Add server administrative interface infrastructure.
Fix exception raised within exception code!
Fix exception raised within exception code!
Allow Run#expiry= to accept Time objects as input.
Add a deprecation message when require ‘t2server’ is used.
Add connection-parameters classes.
Use supplied parameters to configure SSL connections.
Connection parameters tests.
Add use of connection parameters to the cli scripts.
Fix Run#status to return state as symbols rather than text.
Enable dynamic selection of XML implementation.
Move URI monkeypatch code to new Util module.
Move String monkeypatch code to Util module.
Remove progress output from Run#wait.
Change all references to UUIDs to ‘identifier’.
Get run ownership from the server for each run.
Facilities for granting and revoking permissions on runs.
Facilities for providing user/pass credentials for secure services.
Add support for uploading trusts for peer verification.
Facilities for providing keypair credentials for secure services.
Secure workflow and Run permissions test cases.
Update Readme with security info.
Update the input port API.
Update the output port API.
t2-get-output: Change -E switch to -x.
t2-get-output: Wire up the -r switch.
t2-get-output: Add -T switch for returning output types.
Remove support for Taverna Server versions < 2.3.
Fake list inputs with baclava.
More detailed documentation in the ReadMe file.
Compatibily note added to the ReadMe file.
Store server addresses internally as URI objects.
t2-run-workflow: Add a no-wait option.
Fix input value escaping to allow XML in inputs.
Add a new API call Run#get_output_ports
Remove Run#ls from the API.
Refactor the code that builds output port lists.
Update and streamline test suite.
Parameterize the Rakefile for use in CI.
Return dates as instances of class Time.
Allow expiry dates to be specified in human readable formats.
Workaround for CXF bug upon server start-up.
t2-run-workflow: accept files as inputs.
Tabulate run information.
Fix an issue with singleton value/empty list confusion for output ports.
Fix two issues with the retrieving of workflow outputs.
Update tests to reflect changes to output code.
Fix horror typo in Server#set_run_input.
Expand test coverage to include more diverse workflows.
Make the require file consistent with the gem name.
Fix run_workflow –input switch for values containing colons.
Require rubygems in all scripts.
Updates to RDoc options.
Rename executables with a consistant name pattern.
Convert t2-delete-all-runs script to be more flexible.
Change the Run#get_output method to correctly return a list.
Stop t2-run-workflow from deleting runs automatically.
Install the scripts as part of the gem.
Fix inconsistencies in the Server API.
Updates to the test suite to reflect recent library updates.
Move to LibXML for parsing server responses.
Don’t pollute global namespace with REXML stuff.
Removed a test that seems to behave oddly.
Add capabilities for https and basic auth.
Use a single http connection per server.
Add baclava input functionality to run_workflow script.
Add baclava output functionality to the Run API.
Add baclava output functionality to run_workflow script.
Document attributes in Server and Run classes.
Update the Run#mkdir method to cope with nested directories.
Add code to the String class to operate on file paths.
Use strip_path methods to sanitize inputs.
Add exceptions for the Server class to raise and rescue.
Add code to handle exceptions to the Server class.
Add exceptions and handlers for the Run class.
Add exception handling code to the example scripts.
Consolidate all PUT operations into one method.
Add top level test suite driver and first testcase.
Move to a Rake based build system.
Add a testcase for the Server.
Add a testcase for the Run class.
Rakefile rules to run rdoc over the source files.
Add rdoc comments to the top-level module.
Add rdoc comments to the exception classes.
Add rdoc comments to the Run class.
Add rdoc comments to the Server class.
Rationalize methods doing HTTP GETs into one.
Add an example script to print server infomation.
Cope with double slashes (//) in URI paths.
Update documentation and version numbers.
Update the workflow wrapping fragment.
Fix getting of output data in root working dir.
Server#runs now returns an array not a hash.
Expose the newly added time attributes for runs.
Add a method to return a run instance given a UUID.
Update Run#ls to return separate lists of ‘dirs’ and ‘files’
Update project config boiler-plate
First cut of T2 Server Ruby API.
Added gemspec file to project.
Add an example script to delete all runs on a server.
Add an example script to run a workflow.
This file is, at least in part, generated by the following command:
$ git log --pretty=format:"* %s" --reverse --no-merges <commit-hash>..